$re = '/NON_SYNONYMOUS_CODING\(([a-zA-Z0-9\.|>_\/]+)\)/';
$str = 'NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTg/cAg|p.Leu270Gln/c.809T>A|506|nfkbiz|protein_coding|CODING|ENSDART00000172454|6|A|WARNING_TRANSCRIPT_NO_START_CODON),,NON_SYNONYMOUS_CODING(MODERATE|MISSENSE|cTg/cAg|p.Leu247Gln/c.740T>A|473|nfkbiz|protein_coding|CODING|ENSDART00000161190|6|A|WARNING_TRANSCRIPT_NO_START_CODON)';
preg_match_all($re, $str, $matches, PREG_SET_ORDER, 0);
// Print the entire match result
var_dump($matches);
Please keep in mind that these code samples are automatically generated and are not guaranteed to work. If you find any syntax errors, feel free to submit a bug report. For a full regex reference for PHP, please visit: http://php.net/manual/en/ref.pcre.php