$re = '/https:\/\/(.?[^\.]*)\.(.?[^\/]*)\/(.*)/m';
$str = 'https://jge-catalog-lake.s3.amazonaws.com/Approved_Data/Cu_Geology/JGE_Template_20201022.gdb.zip
https://jge-catalog-lake.s3.amazonaws.com/Approved_Data/Cu_Geology/pCu_Geology.gdb.zip
https://jge-catalog-lake.s3.amazonaws.com/Approved_Data/Pet_Reservoir/JGE_Template_20201026.gdb.zip
https://jge-data-platform-primary-automation-prod.s3.amazonaws.com/DKU_TSHIRTS/orders_copy/out-s0.csv.gz';
$subst = "\1|||\2|||\3";
$result = preg_replace($re, $subst, $str);
echo "The result of the substitution is ".$result;
Please keep in mind that these code samples are automatically generated and are not guaranteed to work. If you find any syntax errors, feel free to submit a bug report. For a full regex reference for PHP, please visit: http://php.net/manual/en/ref.pcre.php